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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910124.1_cds_XP_016460219.1_53661
CDS Infomation

[gene=LOC107783716] [db_xref=GeneID:107783716] [protein=5-epi-aristolochene synthase-like] [protein_id=XP_016460219.1] [location=complement(join(18582..18878,18985..19230,19384..19522,19653..19871,19948..20323,20421..20679,20784..20894))] [gbkey=CDS]
Sequence

ATGGCCTCAGCAGCAGTTGGAAACTATGAAGAAGAGATTGTTCGCCCTGTGGCCGACTTC
TCCCCCAGTCTATGGGGTGATCAGTTCCTTTCATTCTCCATTGAAAATCAGGCTGCAGAA
AAGTACGCTAAAGAGATTGAAGCGTTGAAGGAACAAACGAGGAGTATGCTATTAGCAACT
GGAAGGAAGTTGGCTGATACGTTGAATTTGATTGACATTATTGAACGCCTTGGCATATCA
TACCACTTTGAGAAAGAAATTGATGAGATTTTGGAGCAAATTTACAACCAAACCTCAAAC
TGCGATGATTTGAGCACTTCTGCACTTCAATTTCGATTGCTTAGGCAACATGGTTTCAAC
ATCTCTCCTGAAATTTTCAGCAAATTCCAAGATGAAAATGGCAAATTCAAAGAGTGTCTT
TCTAACGATGTCTTAGGATTATTGAACTTGTATGAAGCTTCACATGTGAGGACTCATGCT
GACGATATCTTAGAAAACGCACTTGCTTTCTCCACTATCCATCTTGAATTTGTAGCTCCT
CATTTGAAATCTCCACTAAGGGAGCAAGTGACACATGCCCTTGAGCAATGTTTACACAAG
GGCGTACCTAGAGTTGAGACCCGATTCTTCATCTCATCAATCTATGAGAAGGAACAATCA
AAAAATGATGTGTTACTTCGATTTGCCAAATTGGATTTCAATTTGCTCCAGATGTTGCAC
AAACAAGAACTTGCTGAAGTATCAAGGTGGTGGAAAGATTTGGATTTCGTAACAACACTT
CCATATGCTAGAGATCGAGTAGTTGAATGCTACTTTTGGGCATTAGGAGTTTATTTTGAG
CCTCAATACTCTCAAGCTCGCGTCATGCTTGTTAAGACCATATCAATGATTTCGATTGTG
GATGACACCTTTGATGCTTATGGTACAGTTAAAGAACTTGAGGCATACACAGATGCCATA
CAAAGATGGGATATCAACGAAATTGATCGCCTTCCTGATTACATGAAAATCAGTTATAAA
GCTATTCTAGATCTTTACAAGGATTATGAAAAGGAATTATCTAGTGCTGGAAGATCTCAT
ATTGTCTGCCATGCAATAGAAAGAATGAAAGAAGTAGTAAGAAATTATAATGTCGAGTCA
ACATGGTTTATTGAAGGATATAAGCCACCTGTTTCCGAATACCTAAGCAATGCACTAGCA
ACTACTACATATTACTACCTCGCGACAACATCGTATTTGGGCATGAAGTCTGTTACGGAG
CAGGATTTCGAGTGGTTGTCAAAGAATCCTAAAATTCTTGAAGCTAGTGTGATAATATGT
CGAGTCATTGATGACACAGCCACATATGAAGTTGAGAAAAGTAGGGGACAAATTGCAACA
GGAATTGAGTGCTGCATGAGAGATTATGGCATATCAACAGAAGAGGCAATGACTAAATTT
CAAGAAATGGCTGAAGTAGCTTGGAAGGATCTTAATGAAGGACTTCTTAGTCCCACTCCT
GTCTCTACGGAGTTTTTATCTCGTATTCTCAATCTTGCGCGTATTGTTGAGGTTACATAT
ATACACAATCTAGATGGATACACTCATCCGGAGAAAGTCTTAAAACCTCACATTATTGCC
TTGCTTGTGGATTCTATTGAAGTTTAG

Peptide Sequence

PEP ID

XP_016460219.1
PEP Infomation

PREDICTED: 5-epi-aristolochene synthase-like [Nicotiana tabacum]
Sequence

MASAAVGNYEEEIVRPVADFSPSLWGDQFLSFSIENQAAEKYAKEIEALKEQTRSMLLAT
GRKLADTLNLIDIIERLGISYHFEKEIDEILEQIYNQTSNCDDLSTSALQFRLLRQHGFN
ISPEIFSKFQDENGKFKECLSNDVLGLLNLYEASHVRTHADDILENALAFSTIHLEFVAP
HLKSPLREQVTHALEQCLHKGVPRVETRFFISSIYEKEQSKNDVLLRFAKLDFNLLQMLH
KQELAEVSRWWKDLDFVTTLPYARDRVVECYFWALGVYFEPQYSQARVMLVKTISMISIV
DDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSH
IVCHAIERMKEVVRNYNVESTWFIEGYKPPVSEYLSNALATTTYYYLATTSYLGMKSVTE
QDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTEEAMTKF
QEMAEVAWKDLNEGLLSPTPVSTEFLSRILNLARIVEVTYIHNLDGYTHPEKVLKPHIIA
LLVDSIEV

Transcript Sequence

Gene sequence data has not been registered.